Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.29□□□□□ -0.28
Chaf1aQ9QWF0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1aQ9QWF0 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Chaf1aQ9QWF0 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1aQ9QWF0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1aQ9QWF0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.29□□□□□ -0.28
Chaf1aQ9QWF0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1aQ9QWF0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1aQ9QWF0 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1aQ9QWF0 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.29□□□□□ -0.28
Chaf1aQ9QWF0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Chaf1aQ9QWF0 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1aQ9QWF0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1aQ9QWF0 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Btrc-209ENSMUST00000224478 2194 ntBASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Gm12957-201ENSMUST00000117835 377 ntBASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Gm42627-201ENSMUST00000197347 224 ntBASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1aQ9QWF0 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Chaf1aQ9QWF0 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chaf1aQ9QWF0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Chaf1aQ9QWF0 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chaf1aQ9QWF0 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chaf1aQ9QWF0 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Chaf1aQ9QWF0 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chaf1aQ9QWF0 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chaf1aQ9QWF0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Chaf1aQ9QWF0 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Mir1247-201ENSMUST00000116706 82 ntBASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Rprl1-201ENSMUST00000158050 327 ntBASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Snora78-201ENSMUST00000158630 128 ntBASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Gm43118-201ENSMUST00000199149 775 ntBASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Gm5950-201ENSMUST00000213337 772 ntBASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chaf1aQ9QWF0 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chaf1aQ9QWF0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chaf1aQ9QWF0 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chaf1aQ9QWF0 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chaf1aQ9QWF0 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chaf1aQ9QWF0 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms