Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Gm16505-201ENSMUST00000179981 232 ntBASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Mir6927-201ENSMUST00000184494 71 ntBASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Gm28686-201ENSMUST00000187404 609 ntBASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Gm11511-201ENSMUST00000118146 540 ntBASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Gm12217-201ENSMUST00000118858 696 ntBASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Gm43184-201ENSMUST00000197247 542 ntBASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.34□□□□□ -0.43
Chmp2aQ9DB34 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.33□□□□□ -0.43
Chmp2aQ9DB34 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Chmp2aQ9DB34 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Chmp2aQ9DB34 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Chmp2aQ9DB34 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.33□□□□□ -0.43
Chmp2aQ9DB34 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms