Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm13996-201ENSMUST00000118456 430 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm5616-201ENSMUST00000165252 384 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm8741-201ENSMUST00000174736 384 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm25700-201ENSMUST00000177693 110 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm29615-201ENSMUST00000185371 697 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm28224-201ENSMUST00000186078 697 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm29001-201ENSMUST00000186177 697 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm28292-201ENSMUST00000186593 697 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm28101-201ENSMUST00000187608 697 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm29076-201ENSMUST00000187689 697 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm28302-201ENSMUST00000187931 697 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm28646-201ENSMUST00000188220 697 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm28205-201ENSMUST00000189177 697 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm29032-201ENSMUST00000189797 697 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm28695-201ENSMUST00000190300 697 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm37448-201ENSMUST00000192795 697 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm43184-201ENSMUST00000197247 542 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm17812-201ENSMUST00000204935 318 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm17827-201ENSMUST00000211825 742 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Chmp4bQ9D8B3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Gm43860-201ENSMUST00000201742 2705 ntBASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Chmp4bQ9D8B3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Chmp4bQ9D8B3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Chmp4bQ9D8B3 Gm13350-201ENSMUST00000120519 479 ntBASIC14.9□□□□□ -0.02
Chmp4bQ9D8B3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp4bQ9D8B3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms