Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Ldb3-207ENSMUST00000227819 1499 ntBASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Gm5703-201ENSMUST00000186658 3973 ntBASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Gm20796-201ENSMUST00000180355 5838 ntBASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Gm43823-201ENSMUST00000197391 1808 ntBASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Gm44207-201ENSMUST00000204568 1424 ntBASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Gm37042-201ENSMUST00000193816 581 ntBASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 AC132104.2-201ENSMUST00000215011 266 ntBASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTRAFQ9CQE8 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Gm14608-201ENSMUST00000120030 1553 ntBASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Gm15321-201ENSMUST00000121290 288 ntBASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Gm43575-201ENSMUST00000196420 516 ntBASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 AC139382.1-201ENSMUST00000221402 498 ntBASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 AC154687.2-201ENSMUST00000223853 640 ntBASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Spata33-207ENSMUST00000212760 4074 ntBASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTRAFQ9CQE8 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms