Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.62□□□□□ -0.55
Trim8Q99PJ2 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Rprl1-201ENSMUST00000158050 327 ntBASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Gm24548-201ENSMUST00000158650 108 ntBASIC11.62□□□□□ -0.55
Trim8Q99PJ2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Gm27023-201ENSMUST00000182372 285 ntBASIC11.62□□□□□ -0.55
Trim8Q99PJ2 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.62□□□□□ -0.55
Trim8Q99PJ2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim8Q99PJ2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Gm23931-201ENSMUST00000103842 109 ntBASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Gm23912-201ENSMUST00000104687 87 ntBASIC11.61□□□□□ -0.55
Trim8Q99PJ2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Gm5187-201ENSMUST00000117317 991 ntBASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Gm12058-201ENSMUST00000118614 437 ntBASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Gm14247-201ENSMUST00000120950 237 ntBASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Gm24845-201ENSMUST00000158034 109 ntBASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Erich3-203ENSMUST00000189969 3460 ntBASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim8Q99PJ2 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms