Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.49□□□□□ -0.41
Usp11Q99K46 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Usp11Q99K46 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.49□□□□□ -0.41
Usp11Q99K46 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.49□□□□□ -0.41
Usp11Q99K46 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.49□□□□□ -0.41
Usp11Q99K46 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.49□□□□□ -0.41
Usp11Q99K46 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.49□□□□□ -0.41
Usp11Q99K46 Gm38317-201ENSMUST00000195564 343 ntBASIC12.49□□□□□ -0.41
Usp11Q99K46 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.49□□□□□ -0.41
Usp11Q99K46 Gm35960-201ENSMUST00000202712 767 ntBASIC12.49□□□□□ -0.41
Usp11Q99K46 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Usp11Q99K46 Gm6082-201ENSMUST00000215204 454 ntBASIC12.49□□□□□ -0.41
Usp11Q99K46 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.49□□□□□ -0.41
Usp11Q99K46 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Usp11Q99K46 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Usp11Q99K46 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Usp11Q99K46 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Usp11Q99K46 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.49□□□□□ -0.41
Usp11Q99K46 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.49□□□□□ -0.41
Usp11Q99K46 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp11Q99K46 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.48□□□□□ -0.41
Usp11Q99K46 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.48□□□□□ -0.41
Usp11Q99K46 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.48□□□□□ -0.41
Usp11Q99K46 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Usp11Q99K46 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Usp11Q99K46 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.48□□□□□ -0.41
Usp11Q99K46 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Usp11Q99K46 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.48□□□□□ -0.41
Usp11Q99K46 Gm12015-201ENSMUST00000117065 843 ntBASIC12.48□□□□□ -0.41
Usp11Q99K46 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Usp11Q99K46 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.48□□□□□ -0.41
Usp11Q99K46 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.48□□□□□ -0.41
Usp11Q99K46 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.48□□□□□ -0.41
Usp11Q99K46 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.48□□□□□ -0.41
Usp11Q99K46 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.48□□□□□ -0.41
Usp11Q99K46 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.48□□□□□ -0.41
Usp11Q99K46 Gm9996-201ENSMUST00000070359 913 ntBASIC12.48□□□□□ -0.41
Usp11Q99K46 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Usp11Q99K46 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.48□□□□□ -0.41
Usp11Q99K46 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Usp11Q99K46 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp11Q99K46 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp11Q99K46 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp11Q99K46 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Usp11Q99K46 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp11Q99K46 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.47□□□□□ -0.41
Usp11Q99K46 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp11Q99K46 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.47□□□□□ -0.41
Usp11Q99K46 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp11Q99K46 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp11Q99K46 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp11Q99K46 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp11Q99K46 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.47□□□□□ -0.41
Usp11Q99K46 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Usp11Q99K46 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.47□□□□□ -0.41
Usp11Q99K46 Gm15276-201ENSMUST00000145953 498 ntBASIC12.47□□□□□ -0.41
Usp11Q99K46 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Usp11Q99K46 AA914427-201ENSMUST00000193194 1166 ntBASIC12.47□□□□□ -0.41
Usp11Q99K46 Gm44882-201ENSMUST00000205702 802 ntBASIC12.47□□□□□ -0.41
Usp11Q99K46 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.47□□□□□ -0.41
Usp11Q99K46 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.47□□□□□ -0.41
Usp11Q99K46 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms