Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Gm23270-201ENSMUST00000104055 131 ntBASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Gm3961-201ENSMUST00000204425 994 ntBASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Gm8712-201ENSMUST00000221090 701 ntBASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Cts7-204ENSMUST00000225321 1257 ntBASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga3Q91XY5 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms