Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.05□□□□□ -0.48
Lims2Q91XD2 Gm11949-201ENSMUST00000117640 372 ntBASIC12.05□□□□□ -0.48
Lims2Q91XD2 Gm15573-201ENSMUST00000119487 540 ntBASIC12.05□□□□□ -0.48
Lims2Q91XD2 Gm14585-201ENSMUST00000120713 634 ntBASIC12.05□□□□□ -0.48
Lims2Q91XD2 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.05□□□□□ -0.48
Lims2Q91XD2 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Gm4654-201ENSMUST00000183305 982 ntBASIC12.05□□□□□ -0.48
Lims2Q91XD2 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.05□□□□□ -0.48
Lims2Q91XD2 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.05□□□□□ -0.48
Lims2Q91XD2 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.05□□□□□ -0.48
Lims2Q91XD2 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.05□□□□□ -0.48
Lims2Q91XD2 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.05□□□□□ -0.48
Lims2Q91XD2 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.05□□□□□ -0.48
Lims2Q91XD2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims2Q91XD2 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.04□□□□□ -0.48
Lims2Q91XD2 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Gm9550-201ENSMUST00000161130 862 ntBASIC12.04□□□□□ -0.48
Lims2Q91XD2 Gm17391-201ENSMUST00000171036 126 ntBASIC12.04□□□□□ -0.48
Lims2Q91XD2 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.04□□□□□ -0.48
Lims2Q91XD2 Gm5523-201ENSMUST00000180415 997 ntBASIC12.04□□□□□ -0.48
Lims2Q91XD2 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.04□□□□□ -0.48
Lims2Q91XD2 Gm43186-201ENSMUST00000198130 824 ntBASIC12.04□□□□□ -0.48
Lims2Q91XD2 Gm43002-201ENSMUST00000200310 155 ntBASIC12.04□□□□□ -0.48
Lims2Q91XD2 Gm43916-201ENSMUST00000205062 967 ntBASIC12.04□□□□□ -0.48
Lims2Q91XD2 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.04□□□□□ -0.48
Lims2Q91XD2 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Lims2Q91XD2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Lims2Q91XD2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lims2Q91XD2 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims2Q91XD2 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims2Q91XD2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims2Q91XD2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims2Q91XD2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims2Q91XD2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims2Q91XD2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims2Q91XD2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims2Q91XD2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims2Q91XD2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lims2Q91XD2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims2Q91XD2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims2Q91XD2 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lims2Q91XD2 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims2Q91XD2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lims2Q91XD2 Gm4294-201ENSMUST00000105169 614 ntBASIC12.03□□□□□ -0.48
Lims2Q91XD2 Gm16166-201ENSMUST00000118291 787 ntBASIC12.03□□□□□ -0.48
Lims2Q91XD2 Gm11244-201ENSMUST00000121243 237 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms