Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm45594-201ENSMUST00000211717 241 ntBASIC13.53□□□□□ -0.24
Trex1Q91XB0 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.53□□□□□ -0.24
Trex1Q91XB0 Gm19009-201ENSMUST00000223072 823 ntBASIC13.53□□□□□ -0.24
Trex1Q91XB0 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Gm23105-201ENSMUST00000083719 134 ntBASIC13.53□□□□□ -0.24
Trex1Q91XB0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.53□□□□□ -0.24
Trex1Q91XB0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trex1Q91XB0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trex1Q91XB0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trex1Q91XB0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Trex1Q91XB0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trex1Q91XB0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trex1Q91XB0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trex1Q91XB0 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trex1Q91XB0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trex1Q91XB0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trex1Q91XB0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trex1Q91XB0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trex1Q91XB0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.52□□□□□ -0.24
Trex1Q91XB0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.52□□□□□ -0.24
Trex1Q91XB0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trex1Q91XB0 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trex1Q91XB0 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trex1Q91XB0 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.52□□□□□ -0.25
Trex1Q91XB0 Gm24398-201ENSMUST00000157870 109 ntBASIC13.52□□□□□ -0.25
Trex1Q91XB0 Gm27390-201ENSMUST00000184516 176 ntBASIC13.52□□□□□ -0.25
Trex1Q91XB0 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.52□□□□□ -0.25
Trex1Q91XB0 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.52□□□□□ -0.25
Trex1Q91XB0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.52□□□□□ -0.25
Trex1Q91XB0 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.52□□□□□ -0.25
Trex1Q91XB0 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.52□□□□□ -0.25
Trex1Q91XB0 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.52□□□□□ -0.25
Trex1Q91XB0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.52□□□□□ -0.25
Trex1Q91XB0 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trex1Q91XB0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trex1Q91XB0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trex1Q91XB0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trex1Q91XB0 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trex1Q91XB0 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trex1Q91XB0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trex1Q91XB0 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.52□□□□□ -0.25
Trex1Q91XB0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trex1Q91XB0 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trex1Q91XB0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.51□□□□□ -0.25
Trex1Q91XB0 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trex1Q91XB0 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.51□□□□□ -0.25
Trex1Q91XB0 n-R5s84-201ENSMUST00000122591 109 ntBASIC13.51□□□□□ -0.25
Trex1Q91XB0 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.51□□□□□ -0.25
Trex1Q91XB0 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Trex1Q91XB0 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.51□□□□□ -0.25
Trex1Q91XB0 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.51□□□□□ -0.25
Trex1Q91XB0 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.51□□□□□ -0.25
Trex1Q91XB0 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Gm4978-201ENSMUST00000071565 801 ntBASIC13.51□□□□□ -0.25
Trex1Q91XB0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms