Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Gm9555-201ENSMUST00000200908 583 ntBASIC13.63□□□□□ -0.23
Ddx41Q91VN6 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Gm45118-201ENSMUST00000208928 825 ntBASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx41Q91VN6 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.62□□□□□ -0.23
Ddx41Q91VN6 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Gm13035-201ENSMUST00000117496 342 ntBASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Gm7722-201ENSMUST00000120646 741 ntBASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Gm24514-201ENSMUST00000174961 285 ntBASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Mir7677-201ENSMUST00000184226 67 ntBASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 AC153506.1-201ENSMUST00000218768 2915 ntBASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx41Q91VN6 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 BC043934-202ENSMUST00000185694 2356 ntBASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms