Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim29Q8R2Q0 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim29Q8R2Q0 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim29Q8R2Q0 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim29Q8R2Q0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim29Q8R2Q0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Gm17812-201ENSMUST00000204935 318 ntBASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Gm45224-201ENSMUST00000208203 414 ntBASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim29Q8R2Q0 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm29615-201ENSMUST00000185371 697 ntBASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm28224-201ENSMUST00000186078 697 ntBASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm29001-201ENSMUST00000186177 697 ntBASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm28292-201ENSMUST00000186593 697 ntBASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm28101-201ENSMUST00000187608 697 ntBASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm29076-201ENSMUST00000187689 697 ntBASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm28302-201ENSMUST00000187931 697 ntBASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm28646-201ENSMUST00000188220 697 ntBASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm28205-201ENSMUST00000189177 697 ntBASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm29032-201ENSMUST00000189797 697 ntBASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm28695-201ENSMUST00000190300 697 ntBASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm37448-201ENSMUST00000192795 697 ntBASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm17827-201ENSMUST00000211825 742 ntBASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm2553-201ENSMUST00000215986 605 ntBASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Trim29Q8R2Q0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim29Q8R2Q0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim29Q8R2Q0 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim29Q8R2Q0 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim29Q8R2Q0 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim29Q8R2Q0 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim29Q8R2Q0 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim29Q8R2Q0 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms