Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Gm11700-201ENSMUST00000119409 403 ntBASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Gm14247-201ENSMUST00000120950 237 ntBASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Mir6392-201ENSMUST00000184924 108 ntBASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Gm18624-201ENSMUST00000220966 658 ntBASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.75□□□□□ -0.69
Ebf4Q8K4J2 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Gm11424-201ENSMUST00000121929 829 ntBASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Gm5781-201ENSMUST00000219792 443 ntBASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Gm22058-201ENSMUST00000083393 310 ntBASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms