Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Gm43962-201ENSMUST00000203898 190 ntBASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cchcr1Q8K2I2 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Gm11660-201ENSMUST00000120955 412 ntBASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Gm11960-201ENSMUST00000122068 925 ntBASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.97□□□□□ -0.17
Cchcr1Q8K2I2 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Gm26286-201ENSMUST00000104166 134 ntBASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Gm15004-201ENSMUST00000119192 630 ntBASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Gm6334-201ENSMUST00000207083 228 ntBASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms