Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Gm24934-201ENSMUST00000103764 111 ntBASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Gm27847-201ENSMUST00000183711 107 ntBASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Gm27375-201ENSMUST00000183799 107 ntBASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Gm42937-201ENSMUST00000197360 752 ntBASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Gm18711-201ENSMUST00000199341 750 ntBASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc28bQ8CEG5 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Gm8738-201ENSMUST00000172606 329 ntBASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Gm5706-201ENSMUST00000181525 993 ntBASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc28bQ8CEG5 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms