Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Gm11663-201ENSMUST00000117888 290 ntBASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Gm14724-201ENSMUST00000118400 537 ntBASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Gm12501-201ENSMUST00000119163 529 ntBASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Gm11960-201ENSMUST00000122068 925 ntBASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Gm28937-201ENSMUST00000185413 695 ntBASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Gm29400-201ENSMUST00000187208 695 ntBASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Gm28662-201ENSMUST00000188446 695 ntBASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Gm28251-201ENSMUST00000188835 695 ntBASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Gm37318-201ENSMUST00000194325 695 ntBASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Gm38017-201ENSMUST00000194768 695 ntBASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Gm37287-201ENSMUST00000195449 695 ntBASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Gm37793-201ENSMUST00000195548 695 ntBASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Gm6450-201ENSMUST00000200896 574 ntBASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Paupar-201ENSMUST00000194826 3482 ntBASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC15.07■□□□□ 0
Ccdc60Q8C4J0 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Gm4909-201ENSMUST00000118749 794 ntBASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Gm15207-201ENSMUST00000119259 442 ntBASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Gm18734-201ENSMUST00000172937 808 ntBASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Gm42682-201ENSMUST00000198349 1265 ntBASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Rps4l-202ENSMUST00000204242 789 ntBASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Gm5369-201ENSMUST00000217499 588 ntBASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc60Q8C4J0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc60Q8C4J0 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc60Q8C4J0 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ccdc60Q8C4J0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc60Q8C4J0 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Ccdc60Q8C4J0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc60Q8C4J0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC15.05■□□□□ 0
Ccdc60Q8C4J0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc60Q8C4J0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ccdc60Q8C4J0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc60Q8C4J0 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms