Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ska3Q8C263 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.17□□□□□ -0.62
Ska3Q8C263 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.17□□□□□ -0.62
Ska3Q8C263 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
Ska3Q8C263 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska3Q8C263 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.17□□□□□ -0.62
Ska3Q8C263 Gm8343-201ENSMUST00000182705 994 ntBASIC11.17□□□□□ -0.62
Ska3Q8C263 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.17□□□□□ -0.62
Ska3Q8C263 Gm2260-201ENSMUST00000184965 657 ntBASIC11.17□□□□□ -0.62
Ska3Q8C263 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.17□□□□□ -0.62
Ska3Q8C263 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Ska3Q8C263 Gm35960-201ENSMUST00000202712 767 ntBASIC11.17□□□□□ -0.62
Ska3Q8C263 Gm4157-201ENSMUST00000211647 679 ntBASIC11.17□□□□□ -0.62
Ska3Q8C263 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ska3Q8C263 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska3Q8C263 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska3Q8C263 Mir433-201ENSMUST00000093564 124 ntBASIC11.17□□□□□ -0.62
Ska3Q8C263 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska3Q8C263 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska3Q8C263 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska3Q8C263 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska3Q8C263 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska3Q8C263 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska3Q8C263 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska3Q8C263 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Ska3Q8C263 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska3Q8C263 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska3Q8C263 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska3Q8C263 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.16□□□□□ -0.62
Ska3Q8C263 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.16□□□□□ -0.62
Ska3Q8C263 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.16□□□□□ -0.62
Ska3Q8C263 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ska3Q8C263 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.16□□□□□ -0.62
Ska3Q8C263 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Gm23949-201ENSMUST00000104027 127 ntBASIC11.16□□□□□ -0.62
Ska3Q8C263 Gm11660-201ENSMUST00000120955 412 ntBASIC11.16□□□□□ -0.62
Ska3Q8C263 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Mir7677-201ENSMUST00000184226 67 ntBASIC11.16□□□□□ -0.62
Ska3Q8C263 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.16□□□□□ -0.62
Ska3Q8C263 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.16□□□□□ -0.62
Ska3Q8C263 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.16□□□□□ -0.62
Ska3Q8C263 Gm19287-201ENSMUST00000203190 358 ntBASIC11.16□□□□□ -0.62
Ska3Q8C263 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.16□□□□□ -0.62
Ska3Q8C263 Gm270-201ENSMUST00000223010 976 ntBASIC11.16□□□□□ -0.62
Ska3Q8C263 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ska3Q8C263 Gm5705-201ENSMUST00000066241 711 ntBASIC11.16□□□□□ -0.62
Ska3Q8C263 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.16□□□□□ -0.62
Ska3Q8C263 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.16□□□□□ -0.62
Ska3Q8C263 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Ska3Q8C263 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.16□□□□□ -0.62
Ska3Q8C263 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ska3Q8C263 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.16□□□□□ -0.62
Ska3Q8C263 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ska3Q8C263 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska3Q8C263 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska3Q8C263 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska3Q8C263 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska3Q8C263 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska3Q8C263 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska3Q8C263 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska3Q8C263 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ska3Q8C263 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska3Q8C263 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ska3Q8C263 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska3Q8C263 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.15□□□□□ -0.62
Ska3Q8C263 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ska3Q8C263 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska3Q8C263 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska3Q8C263 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ska3Q8C263 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
Ska3Q8C263 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska3Q8C263 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ska3Q8C263 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska3Q8C263 Gm18056-201ENSMUST00000207670 568 ntBASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms