Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp54Q8BL06 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Usp54Q8BL06 Gm14005-210ENSMUST00000225087 1413 ntBASIC16.54■□□□□ 0.24
Usp54Q8BL06 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp54Q8BL06 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Gm14234-201ENSMUST00000119539 845 ntBASIC16.53■□□□□ 0.24
Usp54Q8BL06 Gm14165-201ENSMUST00000121456 952 ntBASIC16.53■□□□□ 0.24
Usp54Q8BL06 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Gm37651-201ENSMUST00000194679 1494 ntBASIC16.53■□□□□ 0.24
Usp54Q8BL06 Gm20554-201ENSMUST00000177421 2352 ntBASIC16.53■□□□□ 0.24
Usp54Q8BL06 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp54Q8BL06 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC16.52■□□□□ 0.24
Usp54Q8BL06 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp54Q8BL06 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Usp54Q8BL06 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp54Q8BL06 Gm13039-201ENSMUST00000118638 794 ntBASIC16.52■□□□□ 0.24
Usp54Q8BL06 Gm16547-201ENSMUST00000159474 293 ntBASIC16.52■□□□□ 0.24
Usp54Q8BL06 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC16.52■□□□□ 0.24
Usp54Q8BL06 Gm17221-201ENSMUST00000163909 481 ntBASIC16.52■□□□□ 0.24
Usp54Q8BL06 Gm17073-201ENSMUST00000168069 556 ntBASIC16.52■□□□□ 0.24
Usp54Q8BL06 Gm25998-201ENSMUST00000175397 53 ntBASIC16.52■□□□□ 0.24
Usp54Q8BL06 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp54Q8BL06 Gm5267-201ENSMUST00000191574 1045 ntBASIC16.52■□□□□ 0.24
Usp54Q8BL06 Gm37782-201ENSMUST00000194879 678 ntBASIC16.52■□□□□ 0.24
Usp54Q8BL06 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp54Q8BL06 AC122024.3-201ENSMUST00000217719 294 ntBASIC16.52■□□□□ 0.24
Usp54Q8BL06 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC16.52■□□□□ 0.24
Usp54Q8BL06 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC16.52■□□□□ 0.24
Usp54Q8BL06 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp54Q8BL06 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp54Q8BL06 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp54Q8BL06 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp54Q8BL06 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp54Q8BL06 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp54Q8BL06 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Usp54Q8BL06 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC16.52■□□□□ 0.24
Usp54Q8BL06 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp54Q8BL06 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Usp54Q8BL06 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Usp54Q8BL06 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
Usp54Q8BL06 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Usp54Q8BL06 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Usp54Q8BL06 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.51■□□□□ 0.23
Usp54Q8BL06 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC16.51■□□□□ 0.23
Usp54Q8BL06 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Gm14398-201ENSMUST00000117287 1073 ntBASIC16.51■□□□□ 0.23
Usp54Q8BL06 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Usp54Q8BL06 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Gm42779-201ENSMUST00000198807 406 ntBASIC16.51■□□□□ 0.23
Usp54Q8BL06 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Gm14005-208ENSMUST00000223654 681 ntBASIC16.51■□□□□ 0.23
Usp54Q8BL06 Gm8894-201ENSMUST00000074642 666 ntBASIC16.51■□□□□ 0.23
Usp54Q8BL06 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Usp54Q8BL06 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Usp54Q8BL06 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Usp54Q8BL06 Gm5740-201ENSMUST00000211003 1857 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms