Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2bQ8BJF9 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Gm25214-201ENSMUST00000104573 129 ntBASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Gm11531-201ENSMUST00000117614 555 ntBASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Gm15824-201ENSMUST00000119516 955 ntBASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Gm15610-201ENSMUST00000120584 195 ntBASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Gm43118-201ENSMUST00000199149 775 ntBASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Gm5950-201ENSMUST00000213337 772 ntBASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Gm19994-201ENSMUST00000217086 586 ntBASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2bQ8BJF9 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Gm7722-201ENSMUST00000120646 741 ntBASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Gm12164-201ENSMUST00000121695 551 ntBASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Mospd4-201ENSMUST00000180618 576 ntBASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms