Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Gm12997-201ENSMUST00000120207 640 ntBASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Gm27341-201ENSMUST00000183570 106 ntBASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Gm7003-201ENSMUST00000195089 312 ntBASIC12.01□□□□□ -0.49
Casc4Q6P2L7 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Gm17827-201ENSMUST00000211825 742 ntBASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.01□□□□□ -0.49
Casc4Q6P2L7 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Casc4Q6P2L7 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Casc4Q6P2L7 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12□□□□□ -0.49
Casc4Q6P2L7 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Casc4Q6P2L7 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Casc4Q6P2L7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Casc4Q6P2L7 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Casc4Q6P2L7 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12□□□□□ -0.49
Casc4Q6P2L7 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12□□□□□ -0.49
Casc4Q6P2L7 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Casc4Q6P2L7 Gm5616-201ENSMUST00000165252 384 ntBASIC12□□□□□ -0.49
Casc4Q6P2L7 Gm8741-201ENSMUST00000174736 384 ntBASIC12□□□□□ -0.49
Casc4Q6P2L7 Gm29199-201ENSMUST00000187766 775 ntBASIC12□□□□□ -0.49
Casc4Q6P2L7 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12□□□□□ -0.49
Casc4Q6P2L7 Gm4959-201ENSMUST00000197271 1044 ntBASIC12□□□□□ -0.49
Casc4Q6P2L7 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12□□□□□ -0.49
Casc4Q6P2L7 Olfr1347-205ENSMUST00000220413 964 ntBASIC12□□□□□ -0.49
Casc4Q6P2L7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12□□□□□ -0.49
Casc4Q6P2L7 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12□□□□□ -0.49
Casc4Q6P2L7 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12□□□□□ -0.49
Casc4Q6P2L7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12□□□□□ -0.49
Casc4Q6P2L7 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Casc4Q6P2L7 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms