Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Foxc1Q61572 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
Foxc1Q61572 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm10434-201ENSMUST00000101158 471 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm26143-201ENSMUST00000104480 108 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Foxc1Q61572 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm12792-201ENSMUST00000117669 1019 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm12502-201ENSMUST00000120197 444 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm11658-201ENSMUST00000120913 1008 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm8738-201ENSMUST00000172606 329 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm2467-201ENSMUST00000182266 1010 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm6981-201ENSMUST00000182467 1008 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm37678-201ENSMUST00000192908 1146 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm5850-201ENSMUST00000192923 1206 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 Ighv1-62-201ENSMUST00000193406 350 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm37724-201ENSMUST00000195240 1221 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm20274-201ENSMUST00000206967 584 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.07□□□□□ -0.96
Foxc1Q61572 AL645546.2-201ENSMUST00000224526 265 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 AC093022.1-201ENSMUST00000226949 1072 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 CT030652.1-201ENSMUST00000227377 1235 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Foxc1Q61572 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Foxc1Q61572 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Foxc1Q61572 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Mir433-201ENSMUST00000093564 124 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Foxc1Q61572 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC9.07□□□□□ -0.96
Foxc1Q61572 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Foxc1Q61572 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Foxc1Q61572 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC9.07□□□□□ -0.96
Foxc1Q61572 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Foxc1Q61572 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm44851-201ENSMUST00000205735 2309 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Foxc1Q61572 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms