Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm11362-201ENSMUST00000118838 850 ntBASIC13.06□□□□□ -0.32
Ift88Q61371 Gm11793-201ENSMUST00000120433 981 ntBASIC13.06□□□□□ -0.32
Ift88Q61371 Gm13786-201ENSMUST00000122371 333 ntBASIC13.06□□□□□ -0.32
Ift88Q61371 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ift88Q61371 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.06□□□□□ -0.32
Ift88Q61371 Gm9192-201ENSMUST00000183221 985 ntBASIC13.06□□□□□ -0.32
Ift88Q61371 Gm9230-201ENSMUST00000188228 532 ntBASIC13.06□□□□□ -0.32
Ift88Q61371 Gm38314-201ENSMUST00000195709 625 ntBASIC13.06□□□□□ -0.32
Ift88Q61371 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.06□□□□□ -0.32
Ift88Q61371 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.06□□□□□ -0.32
Ift88Q61371 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ift88Q61371 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ift88Q61371 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Ift88Q61371 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ift88Q61371 Gm10312-201ENSMUST00000078515 489 ntBASIC13.06□□□□□ -0.32
Ift88Q61371 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ift88Q61371 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ift88Q61371 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ift88Q61371 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ift88Q61371 Gm42463-201ENSMUST00000198041 4886 ntBASIC13.06□□□□□ -0.32
Ift88Q61371 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.06□□□□□ -0.32
Ift88Q61371 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ift88Q61371 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ift88Q61371 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ift88Q61371 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ift88Q61371 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ift88Q61371 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ift88Q61371 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ift88Q61371 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.05□□□□□ -0.32
Ift88Q61371 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ift88Q61371 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.05□□□□□ -0.32
Ift88Q61371 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ift88Q61371 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Gm11439-201ENSMUST00000118598 409 ntBASIC13.05□□□□□ -0.32
Ift88Q61371 Gm11960-201ENSMUST00000122068 925 ntBASIC13.05□□□□□ -0.32
Ift88Q61371 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Gm26956-201ENSMUST00000182176 986 ntBASIC13.05□□□□□ -0.32
Ift88Q61371 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ift88Q61371 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.05□□□□□ -0.32
Ift88Q61371 Gm37489-201ENSMUST00000191883 159 ntBASIC13.05□□□□□ -0.32
Ift88Q61371 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.05□□□□□ -0.32
Ift88Q61371 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.05□□□□□ -0.32
Ift88Q61371 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.05□□□□□ -0.32
Ift88Q61371 Gm45880-201ENSMUST00000213041 853 ntBASIC13.05□□□□□ -0.32
Ift88Q61371 Gm8712-201ENSMUST00000221090 701 ntBASIC13.05□□□□□ -0.32
Ift88Q61371 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ift88Q61371 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.05□□□□□ -0.32
Ift88Q61371 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Ift88Q61371 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Ift88Q61371 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ift88Q61371 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ift88Q61371 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC13.04□□□□□ -0.32
Ift88Q61371 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.04□□□□□ -0.32
Ift88Q61371 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ift88Q61371 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ift88Q61371 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Ift88Q61371 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Ift88Q61371 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.04□□□□□ -0.32
Ift88Q61371 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.04□□□□□ -0.32
Ift88Q61371 Gm45496-201ENSMUST00000209918 2917 ntBASIC13.04□□□□□ -0.32
Ift88Q61371 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Ift88Q61371 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ift88Q61371 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.04□□□□□ -0.32
Ift88Q61371 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ift88Q61371 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.04□□□□□ -0.32
Ift88Q61371 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.04□□□□□ -0.32
Ift88Q61371 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ift88Q61371 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.04□□□□□ -0.32
Ift88Q61371 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.04□□□□□ -0.32
Ift88Q61371 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.04□□□□□ -0.32
Ift88Q61371 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ift88Q61371 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ift88Q61371 Gm10608-202ENSMUST00000213924 676 ntBASIC13.04□□□□□ -0.32
Ift88Q61371 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms