Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.4□□□□□ -0.58
ClpbQ60649 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.4□□□□□ -0.58
ClpbQ60649 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
ClpbQ60649 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
ClpbQ60649 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
ClpbQ60649 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.4□□□□□ -0.58
ClpbQ60649 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
ClpbQ60649 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.4□□□□□ -0.58
ClpbQ60649 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
ClpbQ60649 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
ClpbQ60649 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
ClpbQ60649 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
ClpbQ60649 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.4□□□□□ -0.59
ClpbQ60649 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
ClpbQ60649 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
ClpbQ60649 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.39□□□□□ -0.59
ClpbQ60649 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.39□□□□□ -0.59
ClpbQ60649 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
ClpbQ60649 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
ClpbQ60649 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
ClpbQ60649 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.39□□□□□ -0.59
ClpbQ60649 Gm12036-201ENSMUST00000120008 530 ntBASIC11.39□□□□□ -0.59
ClpbQ60649 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.39□□□□□ -0.59
ClpbQ60649 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.39□□□□□ -0.59
ClpbQ60649 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.39□□□□□ -0.59
ClpbQ60649 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.39□□□□□ -0.59
ClpbQ60649 Gm18730-201ENSMUST00000218038 343 ntBASIC11.39□□□□□ -0.59
ClpbQ60649 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
ClpbQ60649 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.39□□□□□ -0.59
ClpbQ60649 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.39□□□□□ -0.59
ClpbQ60649 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.39□□□□□ -0.59
ClpbQ60649 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ClpbQ60649 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
ClpbQ60649 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
ClpbQ60649 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.38□□□□□ -0.59
ClpbQ60649 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
ClpbQ60649 Gm14208-201ENSMUST00000119645 678 ntBASIC11.38□□□□□ -0.59
ClpbQ60649 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.38□□□□□ -0.59
ClpbQ60649 Gm24749-201ENSMUST00000157838 343 ntBASIC11.38□□□□□ -0.59
ClpbQ60649 Mir5132-201ENSMUST00000175166 71 ntBASIC11.38□□□□□ -0.59
ClpbQ60649 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.38□□□□□ -0.59
ClpbQ60649 Gm18711-201ENSMUST00000199341 750 ntBASIC11.38□□□□□ -0.59
ClpbQ60649 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.38□□□□□ -0.59
ClpbQ60649 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
ClpbQ60649 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.38□□□□□ -0.59
ClpbQ60649 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.38□□□□□ -0.59
ClpbQ60649 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms