Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Gm11660-201ENSMUST00000120955 412 ntBASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Gm9192-201ENSMUST00000183221 985 ntBASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Gm43179-201ENSMUST00000198797 275 ntBASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim38Q5SZ99 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Gm26286-201ENSMUST00000104166 134 ntBASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Gm27320-201ENSMUST00000184892 109 ntBASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Gm7783-201ENSMUST00000204795 781 ntBASIC12.29□□□□□ -0.44
Trim38Q5SZ99 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Gm45331-201ENSMUST00000209868 554 ntBASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim38Q5SZ99 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Gm22133-201ENSMUST00000102082 109 ntBASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Gm15004-201ENSMUST00000119192 630 ntBASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Gm2553-201ENSMUST00000215986 605 ntBASIC12.28□□□□□ -0.44
Trim38Q5SZ99 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.28□□□□□ -0.44
Trim38Q5SZ99 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.28□□□□□ -0.44
Trim38Q5SZ99 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim38Q5SZ99 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms