Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Gm14058-201ENSMUST00000116082 735 ntBASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Gm11663-201ENSMUST00000117888 290 ntBASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Gm8199-201ENSMUST00000121323 823 ntBASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Gm2965-201ENSMUST00000198365 343 ntBASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Gm6450-201ENSMUST00000200896 574 ntBASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Gm7851-201ENSMUST00000117574 323 ntBASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Gm15207-201ENSMUST00000119259 442 ntBASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Gm45575-201ENSMUST00000210283 548 ntBASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nlrc4Q3UP24 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm16570-201ENSMUST00000161951 436 ntBASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm28937-201ENSMUST00000185413 695 ntBASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm29400-201ENSMUST00000187208 695 ntBASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm28662-201ENSMUST00000188446 695 ntBASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm28251-201ENSMUST00000188835 695 ntBASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm37318-201ENSMUST00000194325 695 ntBASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm38017-201ENSMUST00000194768 695 ntBASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm37287-201ENSMUST00000195449 695 ntBASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm37793-201ENSMUST00000195548 695 ntBASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms