Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Gm30055-201ENSMUST00000203175 803 ntBASIC14.66□□□□□ -0.06
Cacna1sQ02789 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Cacna1sQ02789 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC14.66□□□□□ -0.06
Cacna1sQ02789 AC122891.1-201ENSMUST00000218671 268 ntBASIC14.66□□□□□ -0.06
Cacna1sQ02789 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC14.66□□□□□ -0.06
Cacna1sQ02789 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1sQ02789 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cacna1sQ02789 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1sQ02789 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1sQ02789 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1sQ02789 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cacna1sQ02789 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1sQ02789 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1sQ02789 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1sQ02789 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1sQ02789 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1sQ02789 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1sQ02789 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1sQ02789 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1sQ02789 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1sQ02789 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1sQ02789 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gm15746-201ENSMUST00000120684 1027 ntBASIC14.65□□□□□ -0.06
Cacna1sQ02789 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gm9244-201ENSMUST00000056767 2129 ntBASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.65□□□□□ -0.06
Cacna1sQ02789 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.65□□□□□ -0.06
Cacna1sQ02789 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gm4943-201ENSMUST00000132879 424 ntBASIC14.65□□□□□ -0.06
Cacna1sQ02789 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gm18014-201ENSMUST00000183369 817 ntBASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gm4753-201ENSMUST00000188327 1255 ntBASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gm38314-201ENSMUST00000195709 625 ntBASIC14.65□□□□□ -0.06
Cacna1sQ02789 AC154435.1-201ENSMUST00000223938 959 ntBASIC14.65□□□□□ -0.06
Cacna1sQ02789 AC121567.1-201ENSMUST00000227213 842 ntBASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Cacna1sQ02789 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Gm15617-201ENSMUST00000118973 771 ntBASIC14.64□□□□□ -0.07
Cacna1sQ02789 Gm6441-201ENSMUST00000120983 696 ntBASIC14.64□□□□□ -0.07
Cacna1sQ02789 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC14.64□□□□□ -0.07
Cacna1sQ02789 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Gm5210-201ENSMUST00000182150 1010 ntBASIC14.64□□□□□ -0.07
Cacna1sQ02789 Gm6352-201ENSMUST00000203583 1134 ntBASIC14.64□□□□□ -0.07
Cacna1sQ02789 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.64□□□□□ -0.07
Cacna1sQ02789 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1sQ02789 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms