Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Smarcc1P97496 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Smarcc1P97496 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Smarcc1P97496 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Smarcc1P97496 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC14.81□□□□□ -0.04
Smarcc1P97496 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Gm10807-201ENSMUST00000177134 795 ntBASIC14.81□□□□□ -0.04
Smarcc1P97496 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC14.81□□□□□ -0.04
Smarcc1P97496 Gm7504-201ENSMUST00000201449 424 ntBASIC14.81□□□□□ -0.04
Smarcc1P97496 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC14.81□□□□□ -0.04
Smarcc1P97496 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC14.81□□□□□ -0.04
Smarcc1P97496 Gm19046-201ENSMUST00000221263 1298 ntBASIC14.81□□□□□ -0.04
Smarcc1P97496 Gm18968-201ENSMUST00000221319 862 ntBASIC14.81□□□□□ -0.04
Smarcc1P97496 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.81□□□□□ -0.04
Smarcc1P97496 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC14.81□□□□□ -0.04
Smarcc1P97496 Gm44056-201ENSMUST00000204623 1427 ntBASIC14.81□□□□□ -0.04
Smarcc1P97496 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Smarcc1P97496 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Smarcc1P97496 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc1P97496 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smarcc1P97496 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Gm7541-201ENSMUST00000118361 535 ntBASIC14.8□□□□□ -0.04
Smarcc1P97496 Gm11354-201ENSMUST00000121974 422 ntBASIC14.8□□□□□ -0.04
Smarcc1P97496 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smarcc1P97496 AC238811.4-201ENSMUST00000178019 1246 ntBASIC14.8□□□□□ -0.04
Smarcc1P97496 AC238940.3-201ENSMUST00000178830 1246 ntBASIC14.8□□□□□ -0.04
Smarcc1P97496 Gm7741-201ENSMUST00000181445 989 ntBASIC14.8□□□□□ -0.04
Smarcc1P97496 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC14.8□□□□□ -0.04
Smarcc1P97496 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 AC154361.2-201ENSMUST00000224747 943 ntBASIC14.8□□□□□ -0.04
Smarcc1P97496 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smarcc1P97496 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smarcc1P97496 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smarcc1P97496 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc1P97496 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Smarcc1P97496 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Smarcc1P97496 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Smarcc1P97496 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 Gm22379-201ENSMUST00000157480 131 ntBASIC14.79□□□□□ -0.04
Smarcc1P97496 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC14.79□□□□□ -0.04
Smarcc1P97496 Gm17213-201ENSMUST00000165161 1360 ntBASIC14.79□□□□□ -0.04
Smarcc1P97496 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Smarcc1P97496 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Smarcc1P97496 Gm18201-201ENSMUST00000174735 875 ntBASIC14.79□□□□□ -0.04
Smarcc1P97496 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms