Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lig3P97386 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lig3P97386 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lig3P97386 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lig3P97386 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lig3P97386 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lig3P97386 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lig3P97386 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lig3P97386 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lig3P97386 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.02□□□□□ -0.33
Lig3P97386 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lig3P97386 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lig3P97386 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.01□□□□□ -0.33
Lig3P97386 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.01□□□□□ -0.33
Lig3P97386 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Gm23949-201ENSMUST00000104027 127 ntBASIC13.01□□□□□ -0.33
Lig3P97386 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lig3P97386 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Gm15711-201ENSMUST00000118889 535 ntBASIC13.01□□□□□ -0.33
Lig3P97386 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.01□□□□□ -0.33
Lig3P97386 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.01□□□□□ -0.33
Lig3P97386 AY036118-201ENSMUST00000200021 923 ntBASIC13.01□□□□□ -0.33
Lig3P97386 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.01□□□□□ -0.33
Lig3P97386 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.01□□□□□ -0.33
Lig3P97386 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.01□□□□□ -0.33
Lig3P97386 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.01□□□□□ -0.33
Lig3P97386 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lig3P97386 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lig3P97386 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Gm17244-201ENSMUST00000192482 3416 ntBASIC13□□□□□ -0.33
Lig3P97386 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Lig3P97386 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lig3P97386 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13□□□□□ -0.33
Lig3P97386 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Gm6039-201ENSMUST00000121667 1250 ntBASIC13□□□□□ -0.33
Lig3P97386 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13□□□□□ -0.33
Lig3P97386 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 AC132901.1-201ENSMUST00000224345 508 ntBASIC13□□□□□ -0.33
Lig3P97386 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13□□□□□ -0.33
Lig3P97386 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Lig3P97386 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lig3P97386 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lig3P97386 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.99□□□□□ -0.33
Lig3P97386 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms