Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim43cP86449 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim43cP86449 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
Trim43cP86449 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Trim43cP86449 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim43cP86449 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.86□□□□□ -0.35
Trim43cP86449 Gm8566-201ENSMUST00000120174 465 ntBASIC12.86□□□□□ -0.35
Trim43cP86449 Gm14017-201ENSMUST00000121934 386 ntBASIC12.86□□□□□ -0.35
Trim43cP86449 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim43cP86449 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim43cP86449 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim43cP86449 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim43cP86449 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim43cP86449 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim43cP86449 Mir8093-201ENSMUST00000185043 137 ntBASIC12.86□□□□□ -0.35
Trim43cP86449 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Trim43cP86449 Gm43184-201ENSMUST00000197247 542 ntBASIC12.86□□□□□ -0.35
Trim43cP86449 Lect2-202ENSMUST00000225183 823 ntBASIC12.86□□□□□ -0.35
Trim43cP86449 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim43cP86449 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.86□□□□□ -0.35
Trim43cP86449 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.86□□□□□ -0.35
Trim43cP86449 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.86□□□□□ -0.35
Trim43cP86449 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim43cP86449 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trim43cP86449 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43cP86449 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim43cP86449 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim43cP86449 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.85□□□□□ -0.35
Trim43cP86449 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim43cP86449 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim43cP86449 Gm15515-201ENSMUST00000117827 822 ntBASIC12.85□□□□□ -0.35
Trim43cP86449 Gm11700-201ENSMUST00000119409 403 ntBASIC12.85□□□□□ -0.35
Trim43cP86449 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Gm28937-201ENSMUST00000185413 695 ntBASIC12.85□□□□□ -0.35
Trim43cP86449 Gm29400-201ENSMUST00000187208 695 ntBASIC12.85□□□□□ -0.35
Trim43cP86449 Gm28662-201ENSMUST00000188446 695 ntBASIC12.85□□□□□ -0.35
Trim43cP86449 Gm28251-201ENSMUST00000188835 695 ntBASIC12.85□□□□□ -0.35
Trim43cP86449 Gm37444-201ENSMUST00000193605 439 ntBASIC12.85□□□□□ -0.35
Trim43cP86449 Gm37318-201ENSMUST00000194325 695 ntBASIC12.85□□□□□ -0.35
Trim43cP86449 Gm38017-201ENSMUST00000194768 695 ntBASIC12.85□□□□□ -0.35
Trim43cP86449 Gm37287-201ENSMUST00000195449 695 ntBASIC12.85□□□□□ -0.35
Trim43cP86449 Gm37793-201ENSMUST00000195548 695 ntBASIC12.85□□□□□ -0.35
Trim43cP86449 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim43cP86449 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.85□□□□□ -0.35
Trim43cP86449 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.85□□□□□ -0.35
Trim43cP86449 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim43cP86449 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trim43cP86449 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.85□□□□□ -0.35
Trim43cP86449 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.85□□□□□ -0.35
Trim43cP86449 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43cP86449 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim43cP86449 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trim43cP86449 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim43cP86449 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim43cP86449 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms