Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.09□□□□□ -0.47
Tubgcp3P58854 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Gm22323-201ENSMUST00000103832 109 ntBASIC12.09□□□□□ -0.47
Tubgcp3P58854 Gm14441-201ENSMUST00000121960 540 ntBASIC12.09□□□□□ -0.47
Tubgcp3P58854 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.09□□□□□ -0.47
Tubgcp3P58854 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Gm15276-201ENSMUST00000145953 498 ntBASIC12.09□□□□□ -0.47
Tubgcp3P58854 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Gm37259-201ENSMUST00000193903 849 ntBASIC12.09□□□□□ -0.47
Tubgcp3P58854 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Gm13097-201ENSMUST00000210722 397 ntBASIC12.09□□□□□ -0.47
Tubgcp3P58854 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tubgcp3P58854 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.09□□□□□ -0.47
Tubgcp3P58854 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubgcp3P58854 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.09□□□□□ -0.47
Tubgcp3P58854 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Tubgcp3P58854 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
Tubgcp3P58854 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tubgcp3P58854 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tubgcp3P58854 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.08□□□□□ -0.48
Tubgcp3P58854 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.08□□□□□ -0.48
Tubgcp3P58854 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.08□□□□□ -0.48
Tubgcp3P58854 Gm38317-201ENSMUST00000195564 343 ntBASIC12.08□□□□□ -0.48
Tubgcp3P58854 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.08□□□□□ -0.48
Tubgcp3P58854 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.08□□□□□ -0.48
Tubgcp3P58854 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.08□□□□□ -0.48
Tubgcp3P58854 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Olfr582-201ENSMUST00000098212 960 ntBASIC12.08□□□□□ -0.48
Tubgcp3P58854 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.08□□□□□ -0.48
Tubgcp3P58854 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubgcp3P58854 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms