Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.09□□□□□ -0.47
SftpbP50405 Gm7046-201ENSMUST00000221351 977 ntBASIC12.09□□□□□ -0.47
SftpbP50405 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.09□□□□□ -0.47
SftpbP50405 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.09□□□□□ -0.47
SftpbP50405 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SftpbP50405 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SftpbP50405 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SftpbP50405 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SftpbP50405 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SftpbP50405 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SftpbP50405 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SftpbP50405 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.09□□□□□ -0.47
SftpbP50405 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SftpbP50405 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.09□□□□□ -0.47
SftpbP50405 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SftpbP50405 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SftpbP50405 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SftpbP50405 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SftpbP50405 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SftpbP50405 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SftpbP50405 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.09□□□□□ -0.47
SftpbP50405 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
SftpbP50405 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SftpbP50405 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.08□□□□□ -0.48
SftpbP50405 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SftpbP50405 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Gm15370-201ENSMUST00000117158 253 ntBASIC12.08□□□□□ -0.48
SftpbP50405 Gm5419-201ENSMUST00000119301 527 ntBASIC12.08□□□□□ -0.48
SftpbP50405 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.08□□□□□ -0.48
SftpbP50405 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Gm37424-201ENSMUST00000191727 561 ntBASIC12.08□□□□□ -0.48
SftpbP50405 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.08□□□□□ -0.48
SftpbP50405 Gm6013-201ENSMUST00000212264 699 ntBASIC12.08□□□□□ -0.48
SftpbP50405 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.08□□□□□ -0.48
SftpbP50405 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SftpbP50405 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.08□□□□□ -0.48
SftpbP50405 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
SftpbP50405 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SftpbP50405 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SftpbP50405 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SftpbP50405 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SftpbP50405 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SftpbP50405 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SftpbP50405 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SftpbP50405 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.07□□□□□ -0.48
SftpbP50405 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.07□□□□□ -0.48
SftpbP50405 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SftpbP50405 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SftpbP50405 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SftpbP50405 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SftpbP50405 Gm14441-201ENSMUST00000121960 540 ntBASIC12.07□□□□□ -0.48
SftpbP50405 Gm13786-201ENSMUST00000122371 333 ntBASIC12.07□□□□□ -0.48
SftpbP50405 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SftpbP50405 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SftpbP50405 Gm26956-201ENSMUST00000182176 986 ntBASIC12.07□□□□□ -0.48
SftpbP50405 Gm27572-201ENSMUST00000183702 255 ntBASIC12.07□□□□□ -0.48
SftpbP50405 Gm29396-201ENSMUST00000185659 716 ntBASIC12.07□□□□□ -0.48
SftpbP50405 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.07□□□□□ -0.48
SftpbP50405 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SftpbP50405 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SftpbP50405 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.07□□□□□ -0.48
SftpbP50405 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SftpbP50405 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SftpbP50405 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.07□□□□□ -0.48
SftpbP50405 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SftpbP50405 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SftpbP50405 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SftpbP50405 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SftpbP50405 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SftpbP50405 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Erich3-203ENSMUST00000189969 3460 ntBASIC12.06□□□□□ -0.48
SftpbP50405 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms