Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.06□□□□□ -0.16
LtbrP50284 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LtbrP50284 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LtbrP50284 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LtbrP50284 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.06□□□□□ -0.16
LtbrP50284 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.05□□□□□ -0.16
LtbrP50284 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Gm12218-201ENSMUST00000117666 399 ntBASIC14.05□□□□□ -0.16
LtbrP50284 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
LtbrP50284 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC14.05□□□□□ -0.16
LtbrP50284 Gm25604-201ENSMUST00000158359 133 ntBASIC14.05□□□□□ -0.16
LtbrP50284 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LtbrP50284 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC14.05□□□□□ -0.16
LtbrP50284 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LtbrP50284 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC14.05□□□□□ -0.16
LtbrP50284 Gm28439-201ENSMUST00000187714 876 ntBASIC14.05□□□□□ -0.16
LtbrP50284 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
LtbrP50284 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LtbrP50284 Gm44421-201ENSMUST00000205064 1221 ntBASIC14.05□□□□□ -0.16
LtbrP50284 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.05□□□□□ -0.16
LtbrP50284 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC14.05□□□□□ -0.16
LtbrP50284 CT485606.1-201ENSMUST00000213187 878 ntBASIC14.05□□□□□ -0.16
LtbrP50284 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC14.05□□□□□ -0.16
LtbrP50284 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.05□□□□□ -0.16
LtbrP50284 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.05□□□□□ -0.16
LtbrP50284 CT009536.2-201ENSMUST00000225370 665 ntBASIC14.05□□□□□ -0.16
LtbrP50284 Gm4604-201ENSMUST00000025040 390 ntBASIC14.05□□□□□ -0.16
LtbrP50284 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LtbrP50284 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
LtbrP50284 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LtbrP50284 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Gm19680-201ENSMUST00000095050 1513 ntBASIC14.05□□□□□ -0.16
LtbrP50284 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LtbrP50284 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LtbrP50284 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LtbrP50284 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 Gm22920-201ENSMUST00000102175 109 ntBASIC14.04□□□□□ -0.16
LtbrP50284 Gm24231-201ENSMUST00000104315 133 ntBASIC14.04□□□□□ -0.16
LtbrP50284 Gm12943-201ENSMUST00000119616 210 ntBASIC14.04□□□□□ -0.16
LtbrP50284 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.04□□□□□ -0.16
LtbrP50284 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
LtbrP50284 Gm17798-201ENSMUST00000182282 1035 ntBASIC14.04□□□□□ -0.16
LtbrP50284 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC14.04□□□□□ -0.16
LtbrP50284 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.04□□□□□ -0.16
LtbrP50284 Gm37458-201ENSMUST00000194055 410 ntBASIC14.04□□□□□ -0.16
LtbrP50284 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC14.04□□□□□ -0.16
LtbrP50284 Gm45575-201ENSMUST00000210283 548 ntBASIC14.04□□□□□ -0.16
LtbrP50284 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.04□□□□□ -0.16
LtbrP50284 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC14.04□□□□□ -0.16
LtbrP50284 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC14.04□□□□□ -0.16
LtbrP50284 Gm9661-201ENSMUST00000221611 1122 ntBASIC14.04□□□□□ -0.16
LtbrP50284 Ap3s1-202ENSMUST00000224622 978 ntBASIC14.04□□□□□ -0.16
LtbrP50284 AC102368.1-201ENSMUST00000227161 892 ntBASIC14.04□□□□□ -0.16
LtbrP50284 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.04□□□□□ -0.16
LtbrP50284 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
LtbrP50284 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
LtbrP50284 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.04□□□□□ -0.16
LtbrP50284 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.04□□□□□ -0.16
LtbrP50284 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.04□□□□□ -0.16
LtbrP50284 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LtbrP50284 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms