Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.84□□□□□ -0.67
Nkx2-2P42586 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.84□□□□□ -0.67
Nkx2-2P42586 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.67
Nkx2-2P42586 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Nkx2-2P42586 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Nkx2-2P42586 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-2P42586 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.83□□□□□ -0.68
Nkx2-2P42586 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Gm15207-201ENSMUST00000119259 442 ntBASIC10.83□□□□□ -0.68
Nkx2-2P42586 Gm8566-201ENSMUST00000120174 465 ntBASIC10.83□□□□□ -0.68
Nkx2-2P42586 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.83□□□□□ -0.68
Nkx2-2P42586 Gm16505-201ENSMUST00000179981 232 ntBASIC10.83□□□□□ -0.68
Nkx2-2P42586 Mir8093-201ENSMUST00000185043 137 ntBASIC10.83□□□□□ -0.68
Nkx2-2P42586 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.83□□□□□ -0.68
Nkx2-2P42586 Gm5982-201ENSMUST00000196234 512 ntBASIC10.83□□□□□ -0.68
Nkx2-2P42586 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nkx2-2P42586 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.83□□□□□ -0.68
Nkx2-2P42586 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-2P42586 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.83□□□□□ -0.68
Nkx2-2P42586 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.83□□□□□ -0.68
Nkx2-2P42586 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.83□□□□□ -0.68
Nkx2-2P42586 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gm11663-201ENSMUST00000117888 290 ntBASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gm14724-201ENSMUST00000118400 537 ntBASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gm12196-201ENSMUST00000120954 262 ntBASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.82□□□□□ -0.68
Nkx2-2P42586 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gm2383-201ENSMUST00000181461 807 ntBASIC10.82□□□□□ -0.68
Nkx2-2P42586 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gm43002-201ENSMUST00000200310 155 ntBASIC10.82□□□□□ -0.68
Nkx2-2P42586 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.82□□□□□ -0.68
Nkx2-2P42586 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.82□□□□□ -0.68
Nkx2-2P42586 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.82□□□□□ -0.68
Nkx2-2P42586 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.82□□□□□ -0.68
Nkx2-2P42586 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.82□□□□□ -0.68
Nkx2-2P42586 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms