Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC9.72□□□□□ -0.85
VhlP40338 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 Gm16379-201ENSMUST00000161469 348 ntBASIC9.72□□□□□ -0.85
VhlP40338 Gm8801-201ENSMUST00000173255 1064 ntBASIC9.72□□□□□ -0.85
VhlP40338 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 Gm8762-201ENSMUST00000193486 339 ntBASIC9.72□□□□□ -0.85
VhlP40338 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 AC130829.1-201ENSMUST00000221548 494 ntBASIC9.72□□□□□ -0.85
VhlP40338 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
VhlP40338 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
VhlP40338 Gm25857-201ENSMUST00000082788 129 ntBASIC9.72□□□□□ -0.85
VhlP40338 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.72□□□□□ -0.85
VhlP40338 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.72□□□□□ -0.85
VhlP40338 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
VhlP40338 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
VhlP40338 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
VhlP40338 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 Gm7553-201ENSMUST00000185805 1426 ntBASIC9.72□□□□□ -0.85
VhlP40338 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.72□□□□□ -0.85
VhlP40338 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
VhlP40338 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.72□□□□□ -0.85
VhlP40338 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VhlP40338 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
VhlP40338 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
VhlP40338 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
VhlP40338 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
VhlP40338 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.71□□□□□ -0.85
VhlP40338 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.71□□□□□ -0.85
VhlP40338 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
VhlP40338 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
VhlP40338 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
VhlP40338 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
VhlP40338 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.71□□□□□ -0.85
VhlP40338 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.71□□□□□ -0.85
VhlP40338 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.71□□□□□ -0.85
VhlP40338 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
VhlP40338 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
VhlP40338 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC9.71□□□□□ -0.86
VhlP40338 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC9.71□□□□□ -0.86
VhlP40338 Gm16177-201ENSMUST00000120728 718 ntBASIC9.71□□□□□ -0.86
VhlP40338 Gm8908-201ENSMUST00000121633 1024 ntBASIC9.71□□□□□ -0.86
VhlP40338 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
VhlP40338 Gm7809-201ENSMUST00000153199 742 ntBASIC9.71□□□□□ -0.86
VhlP40338 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.71□□□□□ -0.86
VhlP40338 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.71□□□□□ -0.86
VhlP40338 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.71□□□□□ -0.86
VhlP40338 Gm28882-201ENSMUST00000185504 314 ntBASIC9.71□□□□□ -0.86
VhlP40338 Gm43818-201ENSMUST00000200605 466 ntBASIC9.71□□□□□ -0.86
VhlP40338 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC9.71□□□□□ -0.86
VhlP40338 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC9.71□□□□□ -0.86
VhlP40338 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
VhlP40338 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.71□□□□□ -0.86
VhlP40338 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.71□□□□□ -0.86
VhlP40338 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.71□□□□□ -0.86
VhlP40338 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
VhlP40338 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
VhlP40338 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
VhlP40338 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
VhlP40338 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
VhlP40338 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
VhlP40338 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
VhlP40338 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
VhlP40338 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
VhlP40338 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.71□□□□□ -0.86
VhlP40338 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
VhlP40338 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
VhlP40338 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
VhlP40338 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
VhlP40338 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
VhlP40338 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.71□□□□□ -0.86
VhlP40338 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
VhlP40338 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
VhlP40338 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
VhlP40338 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
VhlP40338 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms