Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.16□□□□□ -0.46
Cxcl12P40224 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.16□□□□□ -0.46
Cxcl12P40224 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.16□□□□□ -0.46
Cxcl12P40224 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Cxcl12P40224 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.16□□□□□ -0.46
Cxcl12P40224 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC12.16□□□□□ -0.46
Cxcl12P40224 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Gm37365-201ENSMUST00000193109 409 ntBASIC12.16□□□□□ -0.46
Cxcl12P40224 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.16□□□□□ -0.46
Cxcl12P40224 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.16□□□□□ -0.46
Cxcl12P40224 Gm45085-201ENSMUST00000209100 441 ntBASIC12.16□□□□□ -0.46
Cxcl12P40224 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.16□□□□□ -0.46
Cxcl12P40224 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.16□□□□□ -0.46
Cxcl12P40224 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.16□□□□□ -0.46
Cxcl12P40224 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Cxcl12P40224 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cxcl12P40224 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Cxcl12P40224 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.16□□□□□ -0.46
Cxcl12P40224 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cxcl12P40224 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl12P40224 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cxcl12P40224 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.15□□□□□ -0.46
Cxcl12P40224 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.15□□□□□ -0.46
Cxcl12P40224 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl12P40224 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cxcl12P40224 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl12P40224 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl12P40224 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl12P40224 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl12P40224 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.15□□□□□ -0.46
Cxcl12P40224 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl12P40224 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Cxcl12P40224 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.15□□□□□ -0.46
Cxcl12P40224 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Cxcl12P40224 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cxcl12P40224 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl12P40224 Gm25562-201ENSMUST00000104608 133 ntBASIC12.15□□□□□ -0.46
Cxcl12P40224 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl12P40224 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl12P40224 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.15□□□□□ -0.46
Cxcl12P40224 Gm16219-201ENSMUST00000120096 274 ntBASIC12.15□□□□□ -0.46
Cxcl12P40224 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.15□□□□□ -0.46
Cxcl12P40224 Gm23675-201ENSMUST00000157311 125 ntBASIC12.15□□□□□ -0.46
Cxcl12P40224 Gm25226-201ENSMUST00000158198 123 ntBASIC12.15□□□□□ -0.46
Cxcl12P40224 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.15□□□□□ -0.46
Cxcl12P40224 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.15□□□□□ -0.46
Cxcl12P40224 Gm5996-201ENSMUST00000211110 718 ntBASIC12.15□□□□□ -0.46
Cxcl12P40224 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.15□□□□□ -0.46
Cxcl12P40224 Gm4978-201ENSMUST00000071565 801 ntBASIC12.15□□□□□ -0.46
Cxcl12P40224 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl12P40224 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl12P40224 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl12P40224 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cxcl12P40224 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl12P40224 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl12P40224 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl12P40224 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cxcl12P40224 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cxcl12P40224 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cxcl12P40224 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cxcl12P40224 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cxcl12P40224 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Cxcl12P40224 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cxcl12P40224 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cxcl12P40224 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.15□□□□□ -0.47
Cxcl12P40224 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cxcl12P40224 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cxcl12P40224 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.14□□□□□ -0.47
Cxcl12P40224 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.14□□□□□ -0.47
Cxcl12P40224 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cxcl12P40224 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms