Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Gm45120-201ENSMUST00000208880 408 ntBASIC13.98□□□□□ -0.17
Col3a1P08121 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.98□□□□□ -0.17
Col3a1P08121 Gm6722-201ENSMUST00000221586 390 ntBASIC13.98□□□□□ -0.17
Col3a1P08121 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.98□□□□□ -0.17
Col3a1P08121 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Col3a1P08121 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Col3a1P08121 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.98□□□□□ -0.17
Col3a1P08121 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col3a1P08121 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Col3a1P08121 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.98□□□□□ -0.17
Col3a1P08121 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
Col3a1P08121 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.97□□□□□ -0.17
Col3a1P08121 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.97□□□□□ -0.17
Col3a1P08121 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Col3a1P08121 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Col3a1P08121 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Col3a1P08121 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.97□□□□□ -0.17
Col3a1P08121 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.97□□□□□ -0.17
Col3a1P08121 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Gm15329-201ENSMUST00000121408 155 ntBASIC13.97□□□□□ -0.17
Col3a1P08121 Gm10169-201ENSMUST00000121822 348 ntBASIC13.97□□□□□ -0.17
Col3a1P08121 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.97□□□□□ -0.17
Col3a1P08121 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Gm20392-201ENSMUST00000173047 701 ntBASIC13.97□□□□□ -0.17
Col3a1P08121 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.97□□□□□ -0.17
Col3a1P08121 Gm43163-201ENSMUST00000196571 442 ntBASIC13.97□□□□□ -0.17
Col3a1P08121 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.97□□□□□ -0.17
Col3a1P08121 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Col3a1P08121 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Col3a1P08121 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.97□□□□□ -0.17
Col3a1P08121 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.97□□□□□ -0.17
Col3a1P08121 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Col3a1P08121 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.97□□□□□ -0.17
Col3a1P08121 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col3a1P08121 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Col3a1P08121 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Col3a1P08121 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Col3a1P08121 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.96□□□□□ -0.17
Col3a1P08121 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.96□□□□□ -0.17
Col3a1P08121 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.96□□□□□ -0.17
Col3a1P08121 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.96□□□□□ -0.17
Col3a1P08121 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.96□□□□□ -0.17
Col3a1P08121 Gm42816-201ENSMUST00000198433 325 ntBASIC13.96□□□□□ -0.17
Col3a1P08121 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.96□□□□□ -0.17
Col3a1P08121 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.96□□□□□ -0.17
Col3a1P08121 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.96□□□□□ -0.17
Col3a1P08121 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col3a1P08121 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Col3a1P08121 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.96□□□□□ -0.17
Col3a1P08121 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col3a1P08121 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col3a1P08121 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Col3a1P08121 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms