Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1aO89116 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.81□□□□□ -0.36
Vti1aO89116 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vti1aO89116 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.81□□□□□ -0.36
Vti1aO89116 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.81□□□□□ -0.36
Vti1aO89116 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.81□□□□□ -0.36
Vti1aO89116 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.81□□□□□ -0.36
Vti1aO89116 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.81□□□□□ -0.36
Vti1aO89116 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.81□□□□□ -0.36
Vti1aO89116 Gm9132-201ENSMUST00000210182 832 ntBASIC12.81□□□□□ -0.36
Vti1aO89116 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.81□□□□□ -0.36
Vti1aO89116 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.81□□□□□ -0.36
Vti1aO89116 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vti1aO89116 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vti1aO89116 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vti1aO89116 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vti1aO89116 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.81□□□□□ -0.36
Vti1aO89116 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vti1aO89116 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.81□□□□□ -0.36
Vti1aO89116 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.81□□□□□ -0.36
Vti1aO89116 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.81□□□□□ -0.36
Vti1aO89116 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1aO89116 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vti1aO89116 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vti1aO89116 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.8□□□□□ -0.36
Vti1aO89116 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Gm23912-201ENSMUST00000104687 87 ntBASIC12.8□□□□□ -0.36
Vti1aO89116 Gm11511-201ENSMUST00000118146 540 ntBASIC12.8□□□□□ -0.36
Vti1aO89116 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.8□□□□□ -0.36
Vti1aO89116 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.8□□□□□ -0.36
Vti1aO89116 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vti1aO89116 Gm17391-201ENSMUST00000171036 126 ntBASIC12.8□□□□□ -0.36
Vti1aO89116 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.8□□□□□ -0.36
Vti1aO89116 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Vti1aO89116 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.8□□□□□ -0.36
Vti1aO89116 Gm2965-201ENSMUST00000198365 343 ntBASIC12.8□□□□□ -0.36
Vti1aO89116 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Vti1aO89116 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.8□□□□□ -0.36
Vti1aO89116 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.8□□□□□ -0.36
Vti1aO89116 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vti1aO89116 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vti1aO89116 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vti1aO89116 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Vti1aO89116 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.8□□□□□ -0.36
Vti1aO89116 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.8□□□□□ -0.36
Vti1aO89116 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.8□□□□□ -0.36
Vti1aO89116 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vti1aO89116 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1aO89116 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1aO89116 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Vti1aO89116 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC12.79□□□□□ -0.36
Vti1aO89116 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms