Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
BckdkO55028 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.02□□□□□ -0.64
BckdkO55028 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
BckdkO55028 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
BckdkO55028 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.02□□□□□ -0.65
BckdkO55028 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.02□□□□□ -0.65
BckdkO55028 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
BckdkO55028 Gm12566-201ENSMUST00000121479 359 ntBASIC11.02□□□□□ -0.65
BckdkO55028 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.02□□□□□ -0.65
BckdkO55028 Gm24749-201ENSMUST00000157838 343 ntBASIC11.02□□□□□ -0.65
BckdkO55028 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.02□□□□□ -0.65
BckdkO55028 Mir6979-201ENSMUST00000183927 56 ntBASIC11.02□□□□□ -0.65
BckdkO55028 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.02□□□□□ -0.65
BckdkO55028 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.02□□□□□ -0.65
BckdkO55028 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
BckdkO55028 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
BckdkO55028 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
BckdkO55028 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
BckdkO55028 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.02□□□□□ -0.65
BckdkO55028 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BckdkO55028 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
BckdkO55028 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
BckdkO55028 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
BckdkO55028 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
BckdkO55028 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
BckdkO55028 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
BckdkO55028 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.01□□□□□ -0.65
BckdkO55028 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
BckdkO55028 Gm24934-201ENSMUST00000103764 111 ntBASIC11.01□□□□□ -0.65
BckdkO55028 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.01□□□□□ -0.65
BckdkO55028 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.01□□□□□ -0.65
BckdkO55028 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.01□□□□□ -0.65
BckdkO55028 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
BckdkO55028 Gm42937-201ENSMUST00000197360 752 ntBASIC11.01□□□□□ -0.65
BckdkO55028 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.01□□□□□ -0.65
BckdkO55028 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
BckdkO55028 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.01□□□□□ -0.65
BckdkO55028 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
BckdkO55028 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.01□□□□□ -0.65
BckdkO55028 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
BckdkO55028 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.01□□□□□ -0.65
BckdkO55028 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.01□□□□□ -0.65
BckdkO55028 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
BckdkO55028 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BckdkO55028 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BckdkO55028 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11□□□□□ -0.65
BckdkO55028 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
BckdkO55028 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BckdkO55028 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BckdkO55028 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11□□□□□ -0.65
BckdkO55028 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11□□□□□ -0.65
BckdkO55028 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BckdkO55028 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BckdkO55028 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11□□□□□ -0.65
BckdkO55028 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
BckdkO55028 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
BckdkO55028 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
BckdkO55028 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms