Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Itgb3O54890 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Itgb3O54890 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Itgb3O54890 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Itgb3O54890 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Itgb3O54890 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Itgb3O54890 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Itgb3O54890 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.54□□□□□ -0.4
Itgb3O54890 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Itgb3O54890 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Itgb3O54890 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.54□□□□□ -0.4
Itgb3O54890 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.54□□□□□ -0.4
Itgb3O54890 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.54□□□□□ -0.4
Itgb3O54890 Gm15566-201ENSMUST00000121130 590 ntBASIC12.54□□□□□ -0.4
Itgb3O54890 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.54□□□□□ -0.4
Itgb3O54890 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.54□□□□□ -0.4
Itgb3O54890 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Itgb3O54890 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.54□□□□□ -0.4
Itgb3O54890 Gm9211-201ENSMUST00000182882 975 ntBASIC12.54□□□□□ -0.4
Itgb3O54890 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.54□□□□□ -0.4
Itgb3O54890 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.54□□□□□ -0.4
Itgb3O54890 Gm37835-201ENSMUST00000193305 361 ntBASIC12.54□□□□□ -0.4
Itgb3O54890 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.54□□□□□ -0.4
Itgb3O54890 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Gm7940-201ENSMUST00000218195 769 ntBASIC12.54□□□□□ -0.4
Itgb3O54890 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.54□□□□□ -0.4
Itgb3O54890 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Itgb3O54890 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.54□□□□□ -0.4
Itgb3O54890 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Itgb3O54890 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Itgb3O54890 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.54□□□□□ -0.4
Itgb3O54890 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Itgb3O54890 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Itgb3O54890 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Itgb3O54890 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.53□□□□□ -0.4
Itgb3O54890 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Itgb3O54890 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.53□□□□□ -0.4
Itgb3O54890 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Itgb3O54890 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.53□□□□□ -0.4
Itgb3O54890 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Itgb3O54890 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Itgb3O54890 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Itgb3O54890 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.53□□□□□ -0.4
Itgb3O54890 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.53□□□□□ -0.4
Itgb3O54890 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.53□□□□□ -0.4
Itgb3O54890 Gm45113-201ENSMUST00000207518 165 ntBASIC12.53□□□□□ -0.4
Itgb3O54890 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Itgb3O54890 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.53□□□□□ -0.4
Itgb3O54890 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.53□□□□□ -0.4
Itgb3O54890 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Itgb3O54890 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Itgb3O54890 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Itgb3O54890 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms