Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Limk2O54785 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Limk2O54785 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Limk2O54785 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Limk2O54785 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Limk2O54785 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Limk2O54785 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Limk2O54785 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.03□□□□□ -0.48
Limk2O54785 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Limk2O54785 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Limk2O54785 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Limk2O54785 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Limk2O54785 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.02□□□□□ -0.48
Limk2O54785 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Limk2O54785 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Limk2O54785 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Limk2O54785 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Limk2O54785 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Limk2O54785 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Limk2O54785 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Limk2O54785 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.02□□□□□ -0.48
Limk2O54785 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Limk2O54785 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Limk2O54785 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Limk2O54785 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Limk2O54785 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Limk2O54785 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Limk2O54785 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Limk2O54785 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Limk2O54785 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Limk2O54785 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Limk2O54785 Gm13035-201ENSMUST00000117496 342 ntBASIC12.02□□□□□ -0.49
Limk2O54785 Gm11628-201ENSMUST00000117568 171 ntBASIC12.02□□□□□ -0.49
Limk2O54785 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Limk2O54785 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.02□□□□□ -0.49
Limk2O54785 Gm11941-201ENSMUST00000119904 610 ntBASIC12.02□□□□□ -0.49
Limk2O54785 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Limk2O54785 Gm12208-201ENSMUST00000122004 163 ntBASIC12.02□□□□□ -0.49
Limk2O54785 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Limk2O54785 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Limk2O54785 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Limk2O54785 Mir7677-201ENSMUST00000184226 67 ntBASIC12.02□□□□□ -0.49
Limk2O54785 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Limk2O54785 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Limk2O54785 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Limk2O54785 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Limk2O54785 Gm10179-201ENSMUST00000086233 688 ntBASIC12.02□□□□□ -0.49
Limk2O54785 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Limk2O54785 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Limk2O54785 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Limk2O54785 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Limk2O54785 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Limk2O54785 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.02□□□□□ -0.49
Limk2O54785 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.02□□□□□ -0.49
Limk2O54785 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Limk2O54785 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Limk2O54785 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.02□□□□□ -0.49
Limk2O54785 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.02□□□□□ -0.49
Limk2O54785 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Limk2O54785 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Limk2O54785 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Limk2O54785 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Limk2O54785 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Limk2O54785 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.02□□□□□ -0.49
Limk2O54785 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.02□□□□□ -0.49
Limk2O54785 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Limk2O54785 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Limk2O54785 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Limk2O54785 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.01□□□□□ -0.49
Limk2O54785 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Limk2O54785 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Limk2O54785 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Limk2O54785 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.01□□□□□ -0.49
Limk2O54785 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Limk2O54785 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Limk2O54785 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Limk2O54785 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Limk2O54785 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Limk2O54785 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.01□□□□□ -0.49
Limk2O54785 Gm11509-201ENSMUST00000117358 325 ntBASIC12.01□□□□□ -0.49
Limk2O54785 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.01□□□□□ -0.49
Limk2O54785 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Limk2O54785 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Limk2O54785 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.01□□□□□ -0.49
Limk2O54785 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.01□□□□□ -0.49
Limk2O54785 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Limk2O54785 Gm44551-201ENSMUST00000208804 171 ntBASIC12.01□□□□□ -0.49
Limk2O54785 Gm2553-201ENSMUST00000215986 605 ntBASIC12.01□□□□□ -0.49
Limk2O54785 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Limk2O54785 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.01□□□□□ -0.49
Limk2O54785 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Limk2O54785 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Limk2O54785 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Limk2O54785 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Limk2O54785 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Limk2O54785 Gm21811-201ENSMUST00000096485 930 ntBASIC12.01□□□□□ -0.49
Limk2O54785 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Limk2O54785 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Limk2O54785 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.01□□□□□ -0.49
Limk2O54785 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms