Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1bO08603 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1bO08603 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1bO08603 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1bO08603 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.51□□□□□ -0.73
Raet1bO08603 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1bO08603 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1bO08603 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Raet1bO08603 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1bO08603 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1bO08603 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.51□□□□□ -0.73
Raet1bO08603 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.51□□□□□ -0.73
Raet1bO08603 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1bO08603 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1bO08603 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1bO08603 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.51□□□□□ -0.73
Raet1bO08603 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1bO08603 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1bO08603 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Raet1bO08603 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.5□□□□□ -0.73
Raet1bO08603 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.5□□□□□ -0.73
Raet1bO08603 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Gm22133-201ENSMUST00000102082 109 ntBASIC10.5□□□□□ -0.73
Raet1bO08603 Gm26286-201ENSMUST00000104166 134 ntBASIC10.5□□□□□ -0.73
Raet1bO08603 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Raet1bO08603 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.5□□□□□ -0.73
Raet1bO08603 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.5□□□□□ -0.73
Raet1bO08603 Gm9192-201ENSMUST00000183221 985 ntBASIC10.5□□□□□ -0.73
Raet1bO08603 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Raet1bO08603 Gm17812-201ENSMUST00000204935 318 ntBASIC10.5□□□□□ -0.73
Raet1bO08603 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.5□□□□□ -0.73
Raet1bO08603 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Raet1bO08603 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Raet1bO08603 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.5□□□□□ -0.73
Raet1bO08603 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.5□□□□□ -0.73
Raet1bO08603 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Raet1bO08603 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Raet1bO08603 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.5□□□□□ -0.73
Raet1bO08603 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1bO08603 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.49□□□□□ -0.73
Raet1bO08603 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.49□□□□□ -0.73
Raet1bO08603 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.49□□□□□ -0.73
Raet1bO08603 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Raet1bO08603 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Raet1bO08603 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.49□□□□□ -0.73
Raet1bO08603 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1bO08603 Gm15004-201ENSMUST00000119192 630 ntBASIC10.49□□□□□ -0.73
Raet1bO08603 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms