Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.51□□□□□ -0.73
Raet1aO08602 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Raet1aO08602 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Raet1aO08602 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1aO08602 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1aO08602 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1aO08602 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.51□□□□□ -0.73
Raet1aO08602 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1aO08602 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1aO08602 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Raet1aO08602 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1aO08602 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1aO08602 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.51□□□□□ -0.73
Raet1aO08602 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1aO08602 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1aO08602 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1aO08602 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.51□□□□□ -0.73
Raet1aO08602 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1aO08602 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Raet1aO08602 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Raet1aO08602 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Raet1aO08602 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.5□□□□□ -0.73
Raet1aO08602 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.5□□□□□ -0.73
Raet1aO08602 Gm22133-201ENSMUST00000102082 109 ntBASIC10.5□□□□□ -0.73
Raet1aO08602 Gm26286-201ENSMUST00000104166 134 ntBASIC10.5□□□□□ -0.73
Raet1aO08602 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Raet1aO08602 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.5□□□□□ -0.73
Raet1aO08602 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.5□□□□□ -0.73
Raet1aO08602 Gm9192-201ENSMUST00000183221 985 ntBASIC10.5□□□□□ -0.73
Raet1aO08602 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Raet1aO08602 Gm17812-201ENSMUST00000204935 318 ntBASIC10.5□□□□□ -0.73
Raet1aO08602 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.5□□□□□ -0.73
Raet1aO08602 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Raet1aO08602 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Raet1aO08602 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.5□□□□□ -0.73
Raet1aO08602 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Raet1aO08602 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.5□□□□□ -0.73
Raet1aO08602 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Raet1aO08602 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Raet1aO08602 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.49□□□□□ -0.73
Raet1aO08602 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.49□□□□□ -0.73
Raet1aO08602 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Raet1aO08602 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Raet1aO08602 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.49□□□□□ -0.73
Raet1aO08602 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Raet1aO08602 Gm15004-201ENSMUST00000119192 630 ntBASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms