Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Gm25053-201ENSMUST00000103982 133 ntBASIC14.28□□□□□ -0.12
NpcdF8VQB8 Gm25922-201ENSMUST00000104281 130 ntBASIC14.28□□□□□ -0.12
NpcdF8VQB8 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Gm12712-201ENSMUST00000120676 801 ntBASIC14.28□□□□□ -0.12
NpcdF8VQB8 Gm14993-201ENSMUST00000121180 164 ntBASIC14.28□□□□□ -0.12
NpcdF8VQB8 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Gm24679-201ENSMUST00000158762 111 ntBASIC14.28□□□□□ -0.12
NpcdF8VQB8 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Gm9136-201ENSMUST00000193368 454 ntBASIC14.28□□□□□ -0.12
NpcdF8VQB8 Gm25053-202ENSMUST00000199731 132 ntBASIC14.28□□□□□ -0.12
NpcdF8VQB8 Gm6423-201ENSMUST00000204315 934 ntBASIC14.28□□□□□ -0.12
NpcdF8VQB8 Gm45135-201ENSMUST00000206787 1184 ntBASIC14.28□□□□□ -0.12
NpcdF8VQB8 Gm18706-201ENSMUST00000210053 1066 ntBASIC14.28□□□□□ -0.12
NpcdF8VQB8 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NpcdF8VQB8 n-R5s185-201ENSMUST00000083953 119 ntBASIC14.28□□□□□ -0.12
NpcdF8VQB8 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NpcdF8VQB8 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NpcdF8VQB8 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NpcdF8VQB8 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NpcdF8VQB8 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.27□□□□□ -0.12
NpcdF8VQB8 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NpcdF8VQB8 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NpcdF8VQB8 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NpcdF8VQB8 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.27□□□□□ -0.12
NpcdF8VQB8 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NpcdF8VQB8 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NpcdF8VQB8 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NpcdF8VQB8 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
NpcdF8VQB8 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Gm14270-201ENSMUST00000118388 846 ntBASIC14.27□□□□□ -0.13
NpcdF8VQB8 Gm5419-201ENSMUST00000119301 527 ntBASIC14.27□□□□□ -0.13
NpcdF8VQB8 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Gm12453-201ENSMUST00000121981 331 ntBASIC14.27□□□□□ -0.13
NpcdF8VQB8 Gm7150-201ENSMUST00000122032 981 ntBASIC14.27□□□□□ -0.13
NpcdF8VQB8 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NpcdF8VQB8 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Gm5870-201ENSMUST00000196461 282 ntBASIC14.27□□□□□ -0.13
NpcdF8VQB8 Gm44315-201ENSMUST00000203041 219 ntBASIC14.27□□□□□ -0.13
NpcdF8VQB8 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Olfr692-202ENSMUST00000217827 1126 ntBASIC14.27□□□□□ -0.13
NpcdF8VQB8 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NpcdF8VQB8 AC130477.1-201ENSMUST00000226982 420 ntBASIC14.27□□□□□ -0.13
NpcdF8VQB8 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.27□□□□□ -0.13
NpcdF8VQB8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NpcdF8VQB8 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.27□□□□□ -0.13
NpcdF8VQB8 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NpcdF8VQB8 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.26□□□□□ -0.13
NpcdF8VQB8 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.26□□□□□ -0.13
NpcdF8VQB8 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.26□□□□□ -0.13
NpcdF8VQB8 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Gm6170-201ENSMUST00000187672 1388 ntBASIC14.26□□□□□ -0.13
NpcdF8VQB8 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms