Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.85□□□□□ -0.51
H2afb2S4R1M3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Gm6082-201ENSMUST00000215204 454 ntBASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.85□□□□□ -0.51
H2afb2S4R1M3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb2S4R1M3 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Gm11700-201ENSMUST00000119409 403 ntBASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Gm17812-201ENSMUST00000204935 318 ntBASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Gm2553-201ENSMUST00000215986 605 ntBASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Gm5705-201ENSMUST00000066241 711 ntBASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.84□□□□□ -0.51
H2afb2S4R1M3 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb2S4R1M3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
H2afb2S4R1M3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
H2afb2S4R1M3 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms