Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcb1Q9Z0H3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcb1Q9Z0H3 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Gm11246-201ENSMUST00000120880 345 ntBASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Gm4654-201ENSMUST00000183305 982 ntBASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Gm9136-201ENSMUST00000193368 454 ntBASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Gm43186-201ENSMUST00000198130 824 ntBASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Gm44551-201ENSMUST00000208804 171 ntBASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcb1Q9Z0H3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms