Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Gm14028-201ENSMUST00000117434 479 ntBASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Gm13296-201ENSMUST00000117854 997 ntBASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Rprl1-202ENSMUST00000198476 238 ntBASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tubb3Q9ERD7 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Gm45224-201ENSMUST00000208203 414 ntBASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Gm8385-201ENSMUST00000058999 643 ntBASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tubb3Q9ERD7 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms