Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 Gm6180-201ENSMUST00000065243 498 ntBASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Hmgn3Q9DCB1 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Gm14441-201ENSMUST00000121960 540 ntBASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Gm4768-201ENSMUST00000206199 686 ntBASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hmgn3Q9DCB1 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Gm23984-201ENSMUST00000157139 203 ntBASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Proscos-202ENSMUST00000178990 666 ntBASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hmgn3Q9DCB1 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 227.8 ms