Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Gm42693-201ENSMUST00000196779 631 ntBASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Gm44958-201ENSMUST00000203734 736 ntBASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Morn2-202ENSMUST00000227729 656 ntBASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc130Q9D516 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Gm15370-201ENSMUST00000117158 253 ntBASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.96□□□□□ -0.49
Ccdc130Q9D516 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Gm37489-201ENSMUST00000191883 159 ntBASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Gm6013-201ENSMUST00000212264 699 ntBASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc130Q9D516 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc130Q9D516 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.96□□□□□ -0.5
Ccdc130Q9D516 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
Ccdc130Q9D516 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc130Q9D516 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc130Q9D516 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc130Q9D516 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc130Q9D516 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc130Q9D516 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc130Q9D516 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc130Q9D516 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc130Q9D516 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc130Q9D516 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc130Q9D516 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc130Q9D516 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc130Q9D516 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms