Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Gm23912-201ENSMUST00000104687 87 ntBASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Gm13315-201ENSMUST00000120376 991 ntBASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Gm45930-201ENSMUST00000221330 292 ntBASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.92□□□□□ -0.5
Trim42Q9D2H5 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.92□□□□□ -0.5
Trim42Q9D2H5 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Gm43112-201ENSMUST00000196665 3122 ntBASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim42Q9D2H5 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Gm12203-201ENSMUST00000118235 598 ntBASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Gm12209-201ENSMUST00000120089 596 ntBASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Gm5244-202ENSMUST00000189517 743 ntBASIC11.91□□□□□ -0.5
Trim42Q9D2H5 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Trim42Q9D2H5 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms