Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Gm9115-201ENSMUST00000120192 1348 ntBASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Mir1894-201ENSMUST00000122802 81 ntBASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Gm42693-201ENSMUST00000196779 631 ntBASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Gm17931-201ENSMUST00000208132 634 ntBASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Gm24934-201ENSMUST00000103764 111 ntBASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Gm23912-201ENSMUST00000104687 87 ntBASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Gm12960-201ENSMUST00000120017 1066 ntBASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Gm8515-201ENSMUST00000194852 576 ntBASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Gm6745-201ENSMUST00000199216 526 ntBASIC9.6□□□□□ -0.87
Hdhd3Q9CYW4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms