Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Gm27839-201ENSMUST00000184242 106 ntBASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Gm7561-201ENSMUST00000211203 886 ntBASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Gm5781-201ENSMUST00000219792 443 ntBASIC10.97□□□□□ -0.65
Trim13Q9CYB0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim13Q9CYB0 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Gm13736-201ENSMUST00000119272 253 ntBASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Gm27847-201ENSMUST00000183711 107 ntBASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Gm27375-201ENSMUST00000183799 107 ntBASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.96□□□□□ -0.65
Trim13Q9CYB0 CT009764.1-201ENSMUST00000222260 483 ntBASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trim13Q9CYB0 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Trim13Q9CYB0 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.96□□□□□ -0.66
Trim13Q9CYB0 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim13Q9CYB0 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim13Q9CYB0 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trim13Q9CYB0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Trim13Q9CYB0 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim13Q9CYB0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim13Q9CYB0 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.96□□□□□ -0.66
Trim13Q9CYB0 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.96□□□□□ -0.66
Trim13Q9CYB0 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trim13Q9CYB0 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms